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CATEGORIES:Featured CATEGORIES:Diversity/Inclusion CATEGORIES:Utilities CATEGORIES:Research CATEGORIES:Main CATEGORIES:Student CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190716T145133Z DESCRIPTION:The Summer Scholars Program will wrap up with a poster session on July 26 from 9:00 A.M. - 12:00 P.M. in the second floor foyer of CIEM AS (outside of room 2240). We encourage everyone to attend (staff\, train ees\, faculty\, grad students)\, even if you were not in a lab with one o f these students. They have been working hard on their posters and rehear sing their presentations\, so we would love to have as many people as pos sible to stop by and walk through the posters.\n\nLight breakfast provide d. DURATION:PT1H30M DTSTAMP:20190724T134116Z DTSTART;TZID=America/New_York:20190726T093000 LAST-MODIFIED:20190724T134116Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Summer Scholars Poster Presentation UID:CAL-2c918085-6bf939b2-016b-fb446d82-00000e7ddemobedework@mysite.edu URL:https://genome.duke.edu/events/summer-scholars-poster-presentation-0 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Diversity/Inclusion:/user/pu blic-user/Topics/Diversity_Inclusion X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Applied GenomicPrecisionMedicine,/principals/users/agrp_SchoolofMedicine,":Duke C enter for Applied Genomics and Precision Medicine\,School of Medicine (SO M) X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Student:/user/public-user/Ut ilities/Student X-BEDEWORK-IMAGE-X1:86 X-BEDEWORK-IMAGE-Y1:0 X-BEDEWORK-IMAGE-X2:3525.5 X-BEDEWORK-IMAGE-Y2:2293 X-BEDEWORK-IMAGE-CROP-WIDTH:3439.5 X-BEDEWORK-IMAGE-CROP-HEIGHT:2293 X-BEDEWORK-IMAGE-ALT-TEXT:2019 Summer Scholars Group Photo X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) X-BEDEWORK-IMAGE:/public/Images/DSCN2610_20190716105040AM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/DSCN2610_20190716105040AM-thumb.png X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Featured:/user/public-user/U tilities/Featured END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190904T190656Z DESCRIPTION:Dr. Georgia L. Wiesner is a Professor of Medicine at Vanderbil t University Medical Center and is board-certified in both Internal Medic ine and Medical Genetics and has spent the majority of her career in the fast evolving area of cancer genetics. She serves as the founding Directo r of the Clinical and Translational Hereditary Cancer Program in the Vand erbilt-Ingram Cancer Center\, a NCI designated comprehensive cancer cente r. Established in 2012\, this program is devoted to the care of patients and families with an increased risk for cancer. To date\, over 5000 patie nts have been evaluated in this program. Dr. Wiesner's research interests include family based studies for colon cancer and the translation of gen etic tests into clinical care. Current projects include membership in th e eMERGE III network\, that is sequencing and returning the results for a bout 100 genes for a 25000 participant cohort.\n\nTo join via WebEx\, ple ase contact Julia Walker. DURATION:PT1H DTSTAMP:20190912T160743Z DTSTART;TZID=America/New_York:20190912T120000 LAST-MODIFIED:20190912T160743Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Changing Landscape of Inhertied Cancer: Use of Electronic Medical Record to Improve Patient Care UID:CAL-2c918085-6cf05cac-016c-fdac3475-00006fdbdemobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Georgia Wiesner\, M.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:22 X-BEDEWORK-IMAGE-X2:750 X-BEDEWORK-IMAGE-Y2:522 X-BEDEWORK-IMAGE-CROP-WIDTH:750 X-BEDEWORK-IMAGE-CROP-HEIGHT:500 X-BEDEWORK-IMAGE-ALT-TEXT:Georgia Wiesner headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Georgia Wiesner 2x2_20190904030656PM.jpeg X-BEDEWORK-THUMB-IMAGE:/public/Images/Georgia Wiesner 2x2_20190904030656PM -thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190904T191025Z DESCRIPTION:Director\, Human Genome Sequencing Center\; Professor of Trans lational Biology & Molecular Medicine and Integrative Molecular and Biome dical Sciences\nBaylor College of Medicine DURATION:PT1H DTSTAMP:20190904T191025Z DTSTART;TZID=America/New_York:20190919T120000 LAST-MODIFIED:20190904T191025Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:One Precision Medicine\, Please... UID:CAL-2c918085-6cf05cac-016c-fdaf6580-00007021demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Richard Gibbs\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:10 X-BEDEWORK-IMAGE-X2:600 X-BEDEWORK-IMAGE-Y2:410 X-BEDEWORK-IMAGE-CROP-WIDTH:600 X-BEDEWORK-IMAGE-CROP-HEIGHT:400 X-BEDEWORK-IMAGE-ALT-TEXT:Richard Gibbs headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Richard Gibbs 2x2_20190904031025PM.png X-BEDEWORK-THUMB-IMAGE:/public/Images/Richard Gibbs 2x2_20190904031025PM-t humb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-6ac928f9-016a-d5a1d0f7-00002f8b:Kessenich\ , Alexis CREATED:20190827T162328Z DESCRIPTION:During the past decade\, a new generation of high-throughput D NA sequencers has transformed biomedical and biotechnology research. Thes e new technologies have fostered the development of a wide range of appli cations to basic and clinical research\, including SNP discovery\, transc riptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantages and limitations of vario us methods will be discussed and compared across technologies/platforms ( Illumina\, PacBio\, Oxford Nanopore\, Ion Torrent). This course will also provide an introduction to primary data analysis and data quality assess ment steps. Attendees will become familiar with NGS technology terms and fundamentals\, NGS data format and quality\, and will acquire a better un derstanding of how to choose a suitable NGS sequencing method or instrume nt for their study.\n\nRegistration required: https://duke.qualtrics.com/ jfe/form/SV_bKlpk6mFKRPRs69 DURATION:PT4H DTSTAMP:20190912T195816Z DTSTART;TZID=America/New_York:20190930T120000 LAST-MODIFIED:20190912T195816Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing Technology UID:CAL-2c918085-6cc8734a-016c-d3e3ab25-0000150fdemobedework@mysite.edu URL:https://genome.duke.edu/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190904T191739Z DESCRIPTION:Medical Instructor in the Department of Medicine\nDuke Univers ity DURATION:PT1H DTSTAMP:20190904T191739Z DTSTART;TZID=America/New_York:20191003T120000 LAST-MODIFIED:20190904T191739Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Colonic Polyposis of Unknown Etiology: What is it and What do we d o? UID:CAL-2c918085-6cf05cac-016c-fdb602a5-00007080demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Brian Sullivan\, M.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:47 X-BEDEWORK-IMAGE-X2:600 X-BEDEWORK-IMAGE-Y2:447 X-BEDEWORK-IMAGE-CROP-WIDTH:600 X-BEDEWORK-IMAGE-CROP-HEIGHT:400 X-BEDEWORK-IMAGE-ALT-TEXT:Brian Sullivan headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Brian Sullivan 2x2_20190904031739PM.jpeg X-BEDEWORK-THUMB-IMAGE:/public/Images/Brian Sullivan 2x2_20190904031739PM- thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Engineering CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-6ac928f9-016a-d5a1d0f7-00002f8b:Kessenich\ , Alexis CREATED:20190920T142924Z DESCRIPTION:8:30 - 9:30 a.m. | Targeted Enrichment: The Path to NGS Proces s Efficiency\n\n9:30 - 10 a.m. | Custom Panel Design Workshop \n\n10 - 10 :30 a.m. | Break\n\n10:30 - 11:30 a.m. | Unlocking the Power of Genome En gineering with the Agilent SureGuide Portfolio\n\n11:30 a.m. - noon | CRI SPR Guide Library Design Workshop\n \nnoon - 1:30 p.m. | Custom Design Co nsultation as needed. DURATION:PT5H DTSTAMP:20191001T153706Z DTSTART;TZID=America/New_York:20191009T083000 LAST-MODIFIED:20191001T153706Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Agilent Genomics' NGS Targeted Enrichment and CRISPR Seminars and Custom Design Workshop UID:CAL-2c918085-6d42c156-016d-4f13dd1f-00007569demobedework@mysite.edu URL:https://genome.duke.edu/events/ngs-targeted-enrichment-and-crispr-semi nars-and-custom-design-workshop X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Engineering:/user/public-use r/Topics/Engineering X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190920T204938Z DESCRIPTION:Professor of Medicine\, Global Health and Environmental Health \nDuke University DURATION:PT1H DTSTAMP:20190920T204938Z DTSTART;TZID=America/New_York:20191024T120000 LAST-MODIFIED:20190920T204938Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Novel Pathogen Research at Human-Animal Nexus UID:CAL-2c918085-6d42c156-016d-506ffacd-00001548demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Gregory Gray\, M.D.\, MPH\, FIDSA X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:188 X-BEDEWORK-IMAGE-X2:900 X-BEDEWORK-IMAGE-Y2:788 X-BEDEWORK-IMAGE-CROP-WIDTH:900 X-BEDEWORK-IMAGE-CROP-HEIGHT:600 X-BEDEWORK-IMAGE-ALT-TEXT:Gregory Gray headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/i4200702_20190920044938PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/i4200702_20190920044938PM-thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190920T205413Z DESCRIPTION:Professor of Anatomy & Neurobiology\nBoston University DURATION:PT1H DTSTAMP:20191030T182404Z DTSTART;TZID=America/New_York:20191031T120000 LAST-MODIFIED:20191030T182404Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:The Path to Zero is One: Accelerating Innovation and Discovery for Precision Brain Health UID:CAL-2c918085-6d42c156-016d-50742dbf-000017dademobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Rhoda Au\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:22 X-BEDEWORK-IMAGE-X2:750 X-BEDEWORK-IMAGE-Y2:522 X-BEDEWORK-IMAGE-CROP-WIDTH:750 X-BEDEWORK-IMAGE-CROP-HEIGHT:500 X-BEDEWORK-IMAGE-ALT-TEXT:Rhoda Au headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Rhoda-Au-300x300_20190920045414PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/Rhoda-Au-300x300_20190920045414PM-th umb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ef-40e50555-0141-5f386d11-00005443:Walker\, J ulia CREATED:20190920T205647Z DESCRIPTION:Director\, Center for Applied Genomics at the Joseph Stokes Jr . Research Institute\; Professor of Pediatrics\nChildren's Hospital of Ph iladelphia DURATION:PT1H DTSTAMP:20190920T205647Z DTSTART;TZID=America/New_York:20191107T120000 LAST-MODIFIED:20190920T205647Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Integrative Genomics Discoveries and Development at The Center for Applied Genomics at CHOP UID:CAL-2c918085-6d42c156-016d-5076868c-00001897demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Hakon Hakonarson\, M.D.\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:117 X-BEDEWORK-IMAGE-Y1:0 X-BEDEWORK-IMAGE-X2:750 X-BEDEWORK-IMAGE-Y2:422 X-BEDEWORK-IMAGE-CROP-WIDTH:633 X-BEDEWORK-IMAGE-CROP-HEIGHT:422 X-BEDEWORK-IMAGE-ALT-TEXT:Hakon Hakonarson headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/hakon-ner-320x180_20190920045647PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/hakon-ner-320x180_20190920045647PM-t humb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-6ac928f9-016a-d5a1d0f7-00002f8b:Kessenich\ , Alexis CREATED:20190827T162642Z DESCRIPTION:Liquid chromatography coupled with tandem mass spectrometry (L C/MS/MS) continues to be the key technology for the qualitative and quant itative analysis of peptides\, proteins and metabolites for both basic an d clinical research projects. This GCB Academy session is designed as an introduction for researchers needing to expand their knowledge of the use of LC/MS/MS-based methods for proteomics and metabolomics\, and thus hel p researchers better understand how these technologies can help inform th eir research goals. Background material in basic protein/metabolite chemi stries will be provided\, with an emphasis on how to use the physicochemi cal characteristics of these biomolecules for sample preparation specific ally for LC/MS/MS analyses. In addition\, the fundamentals of liquid chro matography and mass spectrometry will be discussed to enable students to understand the nuances of the experimental designs required to address th eir specific project. Real-world examples will be used to illustrate samp le preparation and analysis strategies\, including basic identification p rojects\, characterization of Post-Translational Modifications and differ ential expression analyses (including 'omic biomarker discovery and targe ted biomarker verification).\n\nRegistration required: https://duke.qualt rics.com/jfe/form/SV_bKlpk6mFKRPRs69 DURATION:PT4H DTSTAMP:20190912T195850Z DTSTART;TZID=America/New_York:20191108T130000 LAST-MODIFIED:20190912T195850Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Fundamentals of Mass Spectrometry for Proteomics and Metabolomics UID:CAL-2c918085-6cc8734a-016c-d3e69f14-00001570demobedework@mysite.edu URL:https://genome.duke.edu/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Arthur Moseley X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-6ac928f9-016a-d5a1d0f7-00002f8b:Kessenich\ , Alexis CREATED:20190827T163605Z DESCRIPTION:Metabolomics has emerged as a powerful approach for characteri zation of molecular systems and also development of biomarkers for diseas e progression or diagnosis. Broadly\, metabolomics is the characterizatio n of small molecules by mass spectrometry and can include both "unbiased" or non-targeted techniques\, as well as "targeted" methods. The measur ement of metabolites by mass spectrometry is also directly translatable t o the clinic\; many common assays such as amino acids\, acylcarnitines\, vitamin D epimers\, steroid hormones\, and drugs of abuse are all clinica l mass spec assays. Whether developing a novel assay or using a validate d metabolite assay\, the most important aspect for a successful metabolom ics study is deciding which technique to use and understanding the data e ach approach will likely be able to provide. In this course\, we will dis cuss sample types which are amenable to metabolomics\, and utilize case s tudies to discuss the critical differences in targeted and non-targeted m etabolomics and an investigator might choose one over another. We will u se example datasets to demonstrate techniques for analysis of high dimens ional metabolomic data. We will also cover the methods needed for accura te quantification\, how to enable longitudinal translation of metabolomic s assays\, and how a targeted mass spec assay may differ in utilization f rom a clinical ELISA.\n\nRegistration required: https://duke.qualtrics.co m/jfe/form/SV_bKlpk6mFKRPRs69 DURATION:PT4H DTSTAMP:20190912T200212Z DTSTART;TZID=America/New_York:20191125T130000 LAST-MODIFIED:20190912T200212Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Metabolomics for Clinical and Basic Research UID:CAL-2c918085-6cc8734a-016c-d3ef379d-000015d3demobedework@mysite.edu URL:https://genome.duke.edu/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-SPEAKER:Will Thompson X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-6ac928f9-016a-d5a1d0f7-00002f8b:Kessenich\ , Alexis CREATED:20190827T163724Z DESCRIPTION:This seminar will offer an introductory overview of key consid erations and best practices in establishing and maintaining clinical bios pecimen collections for genomic and precision medicine research. Topics c overed will include: basic concepts in biobank and cohort research\; rol e of standardization\, harmonization\, and quality control\; maintaining unique sample identification and robust chain-of-custody tracking\; need for secure information and inventory management systems for samples and d ata\; important considerations in repository design\; and an overview of biobanking resources at Duke and beyond.\n\nRegistration required: https: //duke.qualtrics.com/jfe/form/SV_bKlpk6mFKRPRs69 DURATION:PT1H30M DTSTAMP:20191114T181709Z DTSTART;TZID=America/New_York:20191206T090000 LAST-MODIFIED:20191114T181709Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to Biobanking UID:CAL-2c918085-6cc8734a-016c-d3f06c16-000015d4demobedework@mysite.edu URL:https://genome.duke.edu/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Tom Burke X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Utilities CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20191122T224419Z DESCRIPTION:Assistant Professor of Medicine\, Division of Nephrology\nDuke University DURATION:PT1H DTSTAMP:20191211T210149Z DTSTART;TZID=America/New_York:20191219T120000 LAST-MODIFIED:20191211T210149Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Patient-Stem Cell Derived Podocytes as Tools for Modeling APOL 1-A ssociated Kidney Disease UID:CAL-2c918084-6e8730de-016e-9549acd8-00004e56demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/node/9763 X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-SPEAKER:Opeyemi Olabisi\, M.D.\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:120 X-BEDEWORK-IMAGE-X2:960 X-BEDEWORK-IMAGE-Y2:760 X-BEDEWORK-IMAGE-CROP-WIDTH:960 X-BEDEWORK-IMAGE-CROP-HEIGHT:640 X-BEDEWORK-IMAGE-ALT-TEXT:O.Olabisi portrait X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/OOlabisi portrait_20191122054423PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/OOlabisi portrait_20191122054423PM-t humb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Technology CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200102T205427Z DESCRIPTION:Lisa Bastarache\, M.S.\nResearch Assistant Professor\nVanderbi lt University Medical Center DURATION:PT1H DTSTAMP:20200108T214701Z DTSTART;TZID=America/New_York:20200109T120000 LAST-MODIFIED:20200108T214701Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:How Much More Can We Explain With Genetics? Using EHRs to find Und iagnosed Patients UID:CAL-2c918085-6f4aebf3-016f-6809c3fd-00004ed6demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-lisa-bastarache-ms X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Technology:/user/public-user /Topics/Technology X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-SPEAKER:Lisa Bastarache\, M.S. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:52 X-BEDEWORK-IMAGE-X2:648 X-BEDEWORK-IMAGE-Y2:484 X-BEDEWORK-IMAGE-CROP-WIDTH:648 X-BEDEWORK-IMAGE-CROP-HEIGHT:432 X-BEDEWORK-IMAGE-ALT-TEXT:Lisa Bastarache headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Lisa_Bastarache-2_20200102035427PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/Lisa_Bastarache-2_20200102035427PM-t humb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200102T205755Z DESCRIPTION:Joe Grzymski\, Ph.D.\nSenior Director\, Applied Innovation Cen ter\; Associate Research Professor of Microbiology and Computational Biol ogy\nDesert Research Institute DURATION:PT1H DTSTAMP:20200110T204814Z DTSTART;TZID=America/New_York:20200116T120000 LAST-MODIFIED:20200110T204814Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:The Healthy Nevada Project Genetics Study and Linking Phenotype to Genotype UID:CAL-2c918085-6f4aebf3-016f-680cf1e9-00004ed7demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-weekly-forum-joe-grzymski-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Joe Grzymski\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:186 X-BEDEWORK-IMAGE-X2:3600 X-BEDEWORK-IMAGE-Y2:2586 X-BEDEWORK-IMAGE-CROP-WIDTH:3600 X-BEDEWORK-IMAGE-CROP-HEIGHT:2400 X-BEDEWORK-IMAGE-ALT-TEXT:Joe Grzymski headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Joe_Grzymski_20200110124919PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/Joe_Grzymski_20200110124919PM-thumb. png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200102T210953Z DESCRIPTION:Cynthia Moylan\, M.D.\nAssociate Professor of Medicine \nDuke University DURATION:PT1H DTSTAMP:20200116T151830Z DTSTART;TZID=America/New_York:20200123T120000 LAST-MODIFIED:20200116T151830Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:The Looming NASH Epidemic: Using -omics for risk stratification an d prevention UID:CAL-2c918085-6f4aebf3-016f-6817e3fb-00005038demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-cynthia-moylan-md X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Cynthia Moylan\, M.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:70 X-BEDEWORK-IMAGE-X2:576 X-BEDEWORK-IMAGE-Y2:454 X-BEDEWORK-IMAGE-CROP-WIDTH:576 X-BEDEWORK-IMAGE-CROP-HEIGHT:384 X-BEDEWORK-IMAGE-ALT-TEXT:Cynthia Moylan headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/i8228962-2_20200102040953PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/i8228962-2_20200102040953PM-thumb.pn g END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200110T160216Z DESCRIPTION:Ryanne Wu\, M.D.\nAssistant Professor of Medicine\nDuke Univer sity DURATION:PT1H DTSTAMP:20200116T213206Z DTSTART;TZID=America/New_York:20200206T120000 LAST-MODIFIED:20200116T213206Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Impact of Family Health History on Understanding Genomic Risk in S ingaporean Populations UID:CAL-2c918085-6f741da0-016f-90312267-00005a84demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-rebekah-ryanne-wu-md X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Ryanne Wu\, M.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:82 X-BEDEWORK-IMAGE-X2:600 X-BEDEWORK-IMAGE-Y2:482 X-BEDEWORK-IMAGE-CROP-WIDTH:600 X-BEDEWORK-IMAGE-CROP-HEIGHT:400 X-BEDEWORK-IMAGE-ALT-TEXT:Wu headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/i8613352-2_20200110110216AM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/i8613352-2_20200110110216AM-thumb.pn g END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Health/Wellness CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200110T160928Z DESCRIPTION:Elizabeth McNally\, M.D.\, Ph.D.\nDirector\, Center for Geneti c Medicine\; Professor of Medicine and Biochemistry and Molecular Genetic s\nNorthwestern University DURATION:PT1H DTSTAMP:20200110T205142Z DTSTART;TZID=America/New_York:20200213T120000 LAST-MODIFIED:20200110T205142Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Genetic Variation In Heart Failure: From Rare to Common and In Bet ween UID:CAL-2c918085-6f741da0-016f-9037bb3b-00005ca3demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-elizabeth-mcnally-md-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Health_Wellness:/user/public -user/Topics/Health_Wellness X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-SPEAKER:Elizabeth McNally\, M.D.\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:123 X-BEDEWORK-IMAGE-X2:960 X-BEDEWORK-IMAGE-Y2:763 X-BEDEWORK-IMAGE-CROP-WIDTH:960 X-BEDEWORK-IMAGE-CROP-HEIGHT:640 X-BEDEWORK-IMAGE-ALT-TEXT:McNally headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/McNally-Elizabeth-MD-20151001-MPP-5054_202 00110011603PM.jpeg X-BEDEWORK-THUMB-IMAGE:/public/Images/McNally-Elizabeth-MD-20151001-MPP-50 54_20200110011603PM-thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20200122T184343Z DESCRIPTION:Calum MacRae\, M.D.\, Ph.D.\nVice Chair for Scientific Innovat ion\, Brigham and Women's Hospital\; Associate Professor of Medicine\nHar vard Medical School DURATION:PT1H DTSTAMP:20200218T163852Z DTSTART;TZID=America/New_York:20200220T120000 LAST-MODIFIED:20200218T163852Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Overcoming the Barriers to Clinical Whole Genome Sequencing in Rou tine Acute Care UID:CAL-2c918085-6fc68b13-016f-ce9140d3-0000571bdemobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-calum-macrae-md-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=pamela.g.williams@duke.e du:Pamela Williams X-BEDEWORK-SPEAKER:Calum MacRae\, M.D.\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:15 X-BEDEWORK-IMAGE-X2:550 X-BEDEWORK-IMAGE-Y2:381.6666666666667 X-BEDEWORK-IMAGE-CROP-WIDTH:550 X-BEDEWORK-IMAGE-CROP-HEIGHT:366.6666666666667 X-BEDEWORK-IMAGE-ALT-TEXT:Calum MacRae headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Calum-MacRae-headshot_20200122014343PM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/Calum-MacRae-headshot_20200122014343 PM-thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-7018ea1e-0170-36c70ff1-000065c8:Williams\, Pamela CREATED:20200224T160854Z DESCRIPTION:Bryce Seifert\, Ph.D.\nABMGG Laboratory Genetics and Genomics Fellow\nDuke University DURATION:PT1H DTSTAMP:20200225T194116Z DTSTART;TZID=America/New_York:20200305T120000 LAST-MODIFIED:20200225T194116Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Clinical Validity Assessment of Genes Frequently Tested on Heredit ary Cancer Susceptibility Sequencing Panels UID:CAL-2c918085-706b4fb3-0170-77f56343-000025b7demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-bryce-seifert-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Bryce Seifert\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:36 X-BEDEWORK-IMAGE-X2:530 X-BEDEWORK-IMAGE-Y2:389.3333333333333 X-BEDEWORK-IMAGE-CROP-WIDTH:530 X-BEDEWORK-IMAGE-CROP-HEIGHT:353.3333333333333 X-BEDEWORK-IMAGE-ALT-TEXT:Bryce Seifert headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/Bryce_Seifert2_20200224110855AM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/Bryce_Seifert2_20200224110855AM-thum b.png END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-7018ea1e-0170-36c70ff1-000065c8:Williams\, Pamela CREATED:20200224T163444Z DESCRIPTION:Michelle Penny\, Ph.D.\nDirector\, Computational Biology and G enomics\nBiogen DURATION:PT1H DTSTAMP:20200310T173525Z DTSTART;TZID=America/New_York:20200312T120000 LAST-MODIFIED:20200310T173525Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CANCELLED SUMMARY:POSTPONED - Genetically Guided Drug Development: Putting Patients at the Center of What We Do... UID:CAL-2c918085-706b4fb3-0170-780d08e0-00002890demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-michelle-penny-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Michelle Penny\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:39 X-BEDEWORK-IMAGE-X2:530 X-BEDEWORK-IMAGE-Y2:392.3333333333333 X-BEDEWORK-IMAGE-CROP-WIDTH:530 X-BEDEWORK-IMAGE-CROP-HEIGHT:353.3333333333333 X-BEDEWORK-IMAGE-ALT-TEXT:Michelle Penny headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/015D00000045OOjIAM_1497466420000_202002241 13444AM.jpg X-BEDEWORK-THUMB-IMAGE:/public/Images/015D00000045OOjIAM_1497466420000_202 00224113444AM-thumb.png END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ee-55e441e6-0155-ff0a5a44-0000592c:Kocer\, Al issa CREATED:20200226T200742Z DESCRIPTION:The goal of this introductory course is to teach the basic pri nciples of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantag es and limitations of various methods will be discussed and compared acro ss technologies/platforms (Illumina\, PacBio\, Oxford Nanopore\, Ion Torr ent). This course will also provide an introduction to primary data analy sis and data quality assessment steps. Attendees will become familiar wit h NGS technology terms and fundamentals\, NGS data format and quality\, a nd will acquire a better understanding of how to choose a suitable NGS se quencing method or instrument for their study. DURATION:PT4H DTSTAMP:20200312T151644Z DTSTART;TZID=America/New_York:20200325T130000 LAST-MODIFIED:20200312T151644Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CANCELLED SUMMARY:POSTPONED - Introduction to DNA Sequencing Technology UID:CAL-2c918085-706b4fb3-0170-831cb983-000029b9demobedework@mysite.edu URL:https://genome.duke.edu/gcb-academy#DNA X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=2c918085-7018ea1e-0170-36c70ff1-000065c8:Williams\, Pamela CREATED:20200224T164016Z DESCRIPTION:Brendan Lee\, M.D.\, Ph.D.\nChair\, Department of Molecular an d Human Genetics\nBaylor College of Medicine DURATION:PT1H DTSTAMP:20200311T150252Z DTSTART;TZID=America/New_York:20200326T120000 LAST-MODIFIED:20200311T150252Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CANCELLED SUMMARY:POSTPONED - Implementation of Multi-omic Approaches and Counseling in Precision Medicine UID:CAL-2c918085-706b4fb3-0170-78121895-000028f0demobedework@mysite.edu URL:https://precisionmedicine.duke.edu/about/calendar/genomic-and-precisio n-medicine-forum-brendan-lee-md-phd X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_SOM_Cli nDep_Medicine,/principals/users/agrp_SchoolofMedicine,":Department of Med icine\,School of Medicine (SOM) X-BEDEWORK-SPEAKER:Brendan Lee\, M.D.\, Ph.D. X-BEDEWORK-DUKE-SERIES:Genomic and Precision Medicine Weekly Forum X-BEDEWORK-IMAGE-X1:0 X-BEDEWORK-IMAGE-Y1:127 X-BEDEWORK-IMAGE-X2:1803 X-BEDEWORK-IMAGE-Y2:1329 X-BEDEWORK-IMAGE-CROP-WIDTH:1803 X-BEDEWORK-IMAGE-CROP-HEIGHT:1202 X-BEDEWORK-IMAGE-ALT-TEXT:Brendan Lee headshot X-BEDEWORK-SUBMITTEDBY:ahk17 for Duke Center for Applied Genomics and Prec ision Medicine (agrp_AppliedGenomicPrecisionMedicine) X-BEDEWORK-IMAGE:/public/Images/1391367097164_20200224114016AM.jpeg X-BEDEWORK-THUMB-IMAGE:/public/Images/1391367097164_20200224114016AM-thumb .png END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ee-55e441e6-0155-ff0a5a44-0000592c:Kocer\, Al issa CREATED:20200226T201903Z DESCRIPTION:This 90-minute course will provide attendees with an overview of general principles of genetics\, genomics and molecular biology\, and clinical applications and technologies currently used in clinical practic e. In particular\, the course will provide an overview of genomics\, geno me-wide association studies and other large initiatives and a range of te sting technologies for diagnosis and treatment. Introduction of new techn ologies such as liquid biopsies will also be briefly discussed. Continuin g education credits will be available. DURATION:PT1H30M DTSTAMP:20200312T152707Z DTSTART;TZID=America/New_York:20200519T093000 LAST-MODIFIED:20200312T152707Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CANCELLED SUMMARY:POSTPONED - Refresher on Medical Genetics and Genome Medicine UID:CAL-2c918085-706b4fb3-0170-83271e24-00002ad9demobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Schoolo fMedicine,":School of Medicine (SOM) X-BEDEWORK-SPEAKER:Susanne Haga X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None X-BEDEWORK-COST:free CREATED:20210602T124258Z DESCRIPTION:During the past decade\, a new generation of high-throughput D NA sequencers has transformed biomedical and biotechnology research. Thes e new technologies have fostered the development of a wide range of appli cations to basic and clinical research\, including SNP discovery\, transc riptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantages and limitations of vario us methods will be discussed and compared across technologies/platforms ( Illumina\, PacBio\, Oxford Nanopore\, Ion Torrent). This course will also provide an introduction to primary data analysis and data quality assess ment steps. Attendees will become familiar with NGS technology terms and fundamentals\, NGS data format and quality\, and will acquire a better un derstanding of how to choose a suitable NGS sequencing method or instrume nt for their study. DURATION:PT1H25M DTSTAMP:20210602T124258Z DTSTART;TZID=America/New_York:20210603T130000 LAST-MODIFIED:20210602T124258Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing Technology Part I UID:CAL-2c918084-79b12eed-0179-ccbf9570-0000433cdemobedework@mysite.edu URL:https://duke.qualtrics.com/jfe/form/SV_1XETU8glhOeCI0C X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=julia.s.walker@duke.edu: Julia Walker X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Technology CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None X-BEDEWORK-COST:Free CREATED:20210602T130141Z DESCRIPTION:During the past decade\, a new generation of high-throughput D NA sequencers has transformed biomedical and biotechnology research. Thes e new technologies have fostered the development of a wide range of appli cations to basic and clinical research\, including SNP discovery\, transc riptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantages and limitations of vario us methods will be discussed and compared across technologies/platforms ( Illumina\, PacBio\, Oxford Nanopore\, Ion Torrent). This course will also provide an introduction to primary data analysis and data quality assess ment steps. Attendees will become familiar with NGS technology terms and fundamentals\, NGS data format and quality\, and will acquire a better un derstanding of how to choose a suitable NGS sequencing method or instrume nt for their study. DURATION:PT1H25M DTSTAMP:20210602T130354Z DTSTART;TZID=America/New_York:20210610T130000 LAST-MODIFIED:20210602T130354Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing Technology Part II UID:CAL-2c918084-79b12eed-0179-ccd0b9ac-0000433ddemobedework@mysite.edu URL:https://duke.qualtrics.com/jfe/form/SV_1XETU8glhOeCI0C X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Technology:/user/public-user /Topics/Technology X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=julia.s.walker@duke.edu: Julia Walker X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Research CATEGORIES:Open House CATEGORIES:Main CONTACT;X-BEDEWORK-UID=00f1fcdb-0f068baf-010f-068baf83-00000004:None CREATED:20210527T145655Z DESCRIPTION:This year's Summer Scholars from the Summer Scholars Program i n Genome Sciences and Medicine for Underrepresented Minority Underclassme n will present their research during a poster session. DURATION:PT2H DTSTAMP:20210527T145655Z DTSTART;TZID=America/New_York:20210702T093000 LAST-MODIFIED:20210527T145655Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Summer Scholars Poster Session UID:CAL-2c918084-7998f571-0179-ae54133f-000056eddemobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Open House:/user/public-user /Other/Open House X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_Applied GenomicPrecisionMedicine,/principals/users/agrp_AGPM_Collaboratory,":Duke Center for Applied Genomics and Precision Medicine\,Precision Genomics C ollaboratory X-BEDEWORK-STUDENT-CONTACT;X-BEDEWORK-PARAM-EMAIL=julia.s.walker@duke.edu: Julia Walker X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Technology CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ee-55e441e6-0155-ff0a5a44-0000592c:Kocer\, Al issa X-BEDEWORK-COST:Free CREATED:20210823T155226Z DESCRIPTION:During the past decade\, a new generation of high-throughput D NA sequencers has transformed biomedical and biotechnology research. Thes e new technologies have fostered the development of a wide range of appli cations to basic and clinical research\, including SNP discovery\, transc riptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantages and limitations of vario us methods will be discussed and compared across technologies/platforms ( Illumina\, PacBio\, Oxford Nanopore\, Ion Torrent). This course will also provide an introduction to primary data analysis and data quality assess ment steps. Attendees will become familiar with NGS technology terms and fundamentals\, NGS data format and quality\, and will acquire a better un derstanding of how to choose a suitable NGS sequencing method or instrume nt for their study. DURATION:PT1H25M DTSTAMP:20210823T155226Z DTSTART;TZID=America/New_York:20211007T010000 LAST-MODIFIED:20210823T155226Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing Technology Part I UID:CAL-2c918083-7b4d272d-017b-73b68584-000029aademobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Technology:/user/public-user /Topics/Technology X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Training CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Technology CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a0870ee-55e441e6-0155-ff0a5a44-0000592c:Kocer\, Al issa X-BEDEWORK-COST:Free CREATED:20210823T155348Z DESCRIPTION:During the past decade\, a new generation of high-throughput D NA sequencers has transformed biomedical and biotechnology research. Thes e new technologies have fostered the development of a wide range of appli cations to basic and clinical research\, including SNP discovery\, transc riptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next generation sequencing technology (NGS) and to present an overview of various library preparations and their applications. Advantages and limitations of vario us methods will be discussed and compared across technologies/platforms ( Illumina\, PacBio\, Oxford Nanopore\, Ion Torrent). This course will also provide an introduction to primary data analysis and data quality assess ment steps. Attendees will become familiar with NGS technology terms and fundamentals\, NGS data format and quality\, and will acquire a better un derstanding of how to choose a suitable NGS sequencing method or instrume nt for their study. DURATION:PT1H25M DTSTAMP:20210823T155348Z DTSTART;TZID=America/New_York:20211014T010000 LAST-MODIFIED:20210823T155348Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing Technology Part II UID:CAL-2c918083-7b4d272d-017b-73b7c53a-000029abdemobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Training:/user/public-user/O ther/Training X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Technology:/user/public-user /Topics/Technology X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-SPEAKER:Nicolas Devos X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:ak431 for Duke Center for Genomic and Computational Biology (GCB) (agrp_CenterforGenomicandComputationalBiology) END:VEVENT BEGIN:VEVENT CATEGORIES:Medicine CATEGORIES:Engineering CATEGORIES:Lectures/Conferences CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=18832e99-2698c2f9-0126-9eeef589-000001b7:Weitzel\, Marialana L. CREATED:20220627T150142Z DESCRIPTION:Chromatin profiling in single cells has been extremely challen ging and almost exclusively limited to histone proteins. In cases where s ingle cell methods have shown promise\, many require highly specialized e quipment or cell type specific protocols and are relatively low throughpu t. Here\, we combine the advantages of tagmentation\, linear amplificatio n and combinatorial indexing to produce a high throughput single cell DNA binding site mapping method that is simple\, inexpensive\, and capable o f multiplexing several independent samples per experiment. Targeted Inser tion of Promoters (TIP-seq) uses Tn5 fused to protein A to insert a T7 RN A polymerase promoter adjacent to a chromatin-bound protein of interest. Linear amplification of flanking DNA with T7 polymerase provides much hig her starting material prior to sequencing library preparation and yields >10-fold higher unique reads per single cell compared to other methods. DURATION:PT1H DTSTAMP:20220713T191417Z DTSTART;TZID=America/New_York:20220715T100000 LAST-MODIFIED:20220713T191417Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CANCELLED SUMMARY:POSTPONED: Profiling the mammalian epigenome at single-cell resolu tion UID:CAL-8a039360-81409ef1-0181-a5aec57e-00004b81demobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Engineering:/user/public-use r/Topics/Engineering X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Medicine:/user/public-user/T opics/Medicine X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-SPEAKER:Daniel Bartlett\, PhD X-BEDEWORK-DUKE-SERIES:COOPT Postdoc Candidate Seminar X-BEDEWORK-SUBMITTEDBY:ak431 for Center for Advanced Genomic Technologies (agrp_Pratt_CAGT) END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Workshop/Short Course CATEGORIES:Technology CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a038cd8-82f8ec9d-0182-f94f421b-000008b7:Franco\, M atthew X-BEDEWORK-COST:$100 no-show fee CREATED:20220901T145031Z DESCRIPTION:During the past two decades\, a new generation of high-through put DNA sequencers has transformed biomedical and biotechnology research. These new technologies have fostered the development of a wide range of applications to basic and clinical research\, including SNP discovery\, t ranscriptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next genera tion sequencing technology (NGS) and to present an overview of various li brary preparations and their applications. Advantages and limitations of various methods will be discussed and compared across technologies/platfo rms (Illumina\, PacBio\, Oxford Nanopore\, and startup technologies). Thi s course will also provide an introduction to primary data analysis and d ata quality assessment steps. Attendees will become familiar with NGS tec hnology terms and fundamentals\, NGS data format and quality\, and will a cquire a better understanding of how to choose a suitable NGS sequencing method or instrument for their study. DURATION:PT1H DTSTAMP:20220901T145031Z DTSTART;TZID=America/New_York:20220914T143000 LAST-MODIFIED:20220901T145031Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to DNA Sequencing UID:CAL-8a038cd8-82f8ec9d-0182-f9883fa1-00001077demobedework@mysite.edu X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Technology:/user/public-user /Topics/Technology X-BEDEWORK-SPEAKER:Dr. Devi Lenz X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:mef68 for Biostatistics and Bioinformatics (agrp_Sc hoolofMedicine_BiostatisticsandBioinformatics) END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Academic Calendar Dates CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a038cd8-82f8ec9d-0182-f94f421b-000008b7:Franco\, M atthew CREATED:20221017T130100Z DESCRIPTION:This 3-hour workshop will be an introduction to microbiome res earch. We will cover the basics of study design\, sample collection\, pre paration\, sequencing\, and analysis of a microbiome high-throughput ampl icon sequencing (e.g. 16S rRNA) experiment. DURATION:PT3H DTSTAMP:20221017T130100Z DTSTART;TZID=America/New_York:20221017T133000 LAST-MODIFIED:20221017T130100Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Microbiome Workshop UID:CAL-8a0183a7-83184018-0183-e6088454-00005c30demobedework@mysite.edu URL:https://biostat.duke.edu/gcb-home/education/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Academic Calendar Dates:/use r/public-user/Other/Academic Calendar Dates X-BEDEWORK-SPEAKER:Dr. Josh Granek & Dr. So Young Kim X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:mef68 for Biostatistics and Bioinformatics (agrp_Sc hoolofMedicine_BiostatisticsandBioinformatics) END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Academic Calendar Dates CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a038cd8-82f8ec9d-0182-f94f421b-000008b7:Franco\, M atthew CREATED:20221017T125746Z DESCRIPTION:Liquid chromatography coupled with tandem mass spectrometry (L C/MS/MS) continues to be the key technology for the qualitative and quant itative analysis of peptides and proteins for both basic and clinical res earch projects. This GCB Academy session is designed as an introduction f or researchers needing to expand their knowledge of the use of LC/MS/MS-b ased methods for proteomics\, and thus help researchers better understand how these technologies can help inform their research goals. Background material in basic protein chemistries will be provided\, with an emphasis on how to use the physicochemical characteristics of these biomolecules for sample preparation specifically for LC/MS/MS analyses. In addition\, the fundamentals of liquid chromatography and mass spectrometry will be d iscussed to enable students to understand the nuances of the experimental designs required to address their specific project. Real-world examples will be used to illustrate sample preparation and analysis strategies\, i ncluding basic identification projects\, characterization of Post-Transla tional Modifications and differential expression analyses (including 'omi c biomarker discovery and targeted biomarker verification). Finally\, the use of open source software tools for interpretation of these datasets w ill be discussed. DURATION:PT3H DTSTAMP:20221017T125746Z DTSTART;TZID=America/New_York:20221031T090000 LAST-MODIFIED:20221017T125746Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Introduction to Mass Spectrometry Based Proteomics UID:CAL-8a0183a7-83184018-0183-e6058b1f-00005be9demobedework@mysite.edu URL:https://biostat.duke.edu/gcb-home/education/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Academic Calendar Dates:/use r/public-user/Other/Academic Calendar Dates X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-SPEAKER:Erik Soderblom\, Ph.D X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:mef68 for Biostatistics and Bioinformatics (agrp_Sc hoolofMedicine_BiostatisticsandBioinformatics) END:VEVENT BEGIN:VEVENT CATEGORIES:Lectures/Conferences CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Lecture/Talk CATEGORIES:Academic Calendar Dates CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a038cd8-82f8ec9d-0182-f94f421b-000008b7:Franco\, M atthew CREATED:20221017T125937Z DESCRIPTION:This course will provide an in-depth overview of experimental design\, focusing on proteomic analysis of protein post-translational mod ifications (PTMs) and protein expression in (but not limited to) mammalia n cells\, tissues and biofluids. Topics will be aimed at getting maximum biological information from your samples. We will discuss methods for enr iching subproteomes and PTMs\; best practices for insuring sample integri ty and avoiding common contaminants that will be carried downstream\; and how to be aware of additional factors that might influence reproducibili ty across biological replicates. In addition\, we will discuss where disc overy-based or targeted proteomic analyses may be most appropriate. Feel free to bring specific questions about your favorite proteins\, model sys tems\, or biological matrices. DURATION:PT2H30M DTSTAMP:20221017T125937Z DTSTART;TZID=America/New_York:20221110T130000 LAST-MODIFIED:20221017T125937Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:Experimental Design: Get the Most Out of Your Proteome UID:CAL-8a0183a7-83184018-0183-e6073c9c-00005beademobedework@mysite.edu URL:https://biostat.duke.edu/gcb-home/education/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Academic Calendar Dates:/use r/public-user/Other/Academic Calendar Dates X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Lecture_Talk:/user/public-us er/Lectures_Conferences/Lecture_Talk X-BEDEWORK-SPEAKER:Matthew Foster\, Ph.D. X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:mef68 for Biostatistics and Bioinformatics (agrp_Sc hoolofMedicine_BiostatisticsandBioinformatics) END:VEVENT BEGIN:VEVENT CATEGORIES:Other CATEGORIES:Utilities CATEGORIES:Workshop/Short Course CATEGORIES:Research CATEGORIES:Main CONTACT;X-BEDEWORK-UID=8a038cd8-82f8ec9d-0182-f94f421b-000008b7:Franco\, M atthew CREATED:20231003T180138Z DESCRIPTION:During the past two decades\, a new generation of high-through put DNA sequencers has transformed biomedical and biotechnology research. These new technologies have fostered the development of a wide range of applications to basic and clinical research\, including SNP discovery\, t ranscriptome profiling\, genome sequencing\, and epigenetics. The goal of this introductory course is to teach the basic principles of next genera tion sequencing technology (NGS) and to present an overview of various li brary preparations and their applications. Advantages and limitations of various methods will be discussed and compared across technologies/platfo rms (Illumina\, PacBio\, Oxford Nanopore\, and startup technologies). Thi s course will also provide an introduction to primary data analysis and d ata quality assessment steps. Attendees will become familiar with NGS tec hnology terms and fundamentals\, NGS data format and quality\, and will a cquire a better understanding of how to choose a suitable NGS sequencing method or instrument for their study. DURATION:PT1H DTSTAMP:20231003T180138Z DTSTART;TZID=America/New_York:20231019T130000 LAST-MODIFIED:20231003T180138Z LOCATION;X-BEDEWORK-UID=18832edc-1b27e154-011b-2826330e-00000030:Fitzpatri ck CIEMAS 2240 STATUS:CONFIRMED SUMMARY:GCB Academy Introduction to DNA Sequencing UID:CAL-8a03932d-8a96243a-018a-f6b3e14c-00000fa8demobedework@mysite.edu URL:https://biostat.duke.edu/gcb-home/education/gcb-academy X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Main:/user/public-user/Utili ties/Main X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Research:/user/public-user/T opics/Research X-BEDEWORK-ALIAS;X-BEDEWORK-PARAM-DISPLAYNAME=Workshop_Short_Course:/user/ public-user/Other/Workshop_Short_Course X-BEDEWORK-CS;X-BEDEWORK-PARAM-DESCRIPTION="/principals/users/agrp_AGPM_Co llaboratory,":Precision Genomics Collaboratory X-BEDEWORK-SPEAKER:Dr. Devi Lenz X-BEDEWORK-DUKE-SERIES:GCB Academy X-BEDEWORK-SUBMITTEDBY:mef68 for Biostatistics and Bioinformatics (agrp_Sc hoolofMedicine_BiostatisticsandBioinformatics) END:VEVENT END:VCALENDAR