Tensor Learning in 2020s: Methodology, Theory, and Biomedical Applications
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 12, 2022
12:00 pm - 1:00 pm
Anru Zhang
Biology Seminar | Faculty Lightning Talks
Sponsor(s):
Biology
Friday, September 16, 2022
3:30 pm - 4:30 pm
Learning Electrical Connectomes of Neuropsychiatric Disorders and Behaviors
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 19, 2022
12:00 pm - 1:00 pm
David Carlson
Making sense of non-coding genomic intervals
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 26, 2022
12:00 pm - 1:00 pm
Nathan Sheffield
"Modulating the conformation and function of disease-relevant RNA with small molecules": A Chemistry Faculty Colloquium Presented by Prof. Amanda Hargrove
Sponsor(s):
Chemistry
Friday, October 07, 2022
3:00 pm - 4:00 pm
Prof. Amanda Hargrove
Decoding cell fates through single-cell genomics and imaging
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Applied Genomics and Precision Medicine, Duke Center for Genomic and Computational Biology (GCB), and School of Medicine (SOM)
Monday, October 10, 2022
12:00 pm - 1:00 pm
"Advancing Organic Synthesis and Molecular Imaging by Novel Amination Strategies": A Chemistry Faculty Colloquium Presented by Prof. Qiu Wang
Sponsor(s):
Chemistry
Friday, October 14, 2022
3:15 pm - 4:15 pm
Prof. Qiu Wang
Growth Dynamics of Ductal Carcinoma in Situ Recapitulate Normal Breast Development
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Applied Genomics and Precision Medicine, Duke Center for Genomic and Computational Biology (GCB), and School of Medicine (SOM)
Monday, October 17, 2022
12:00 pm - 1:00 pm
Marc Ryser
Generalizing phylogenetics to infer patterns predicted by processes of diversification
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 07, 2022
12:00 pm - 1:00 pm
Jamie R. Oaks
A multi-enhancer hub at the Ets1 locus endows competence for T cell differentiation
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 14, 2022
12:00 pm - 1:00 pm
Golnaz Vahedi
Biology Seminar | Professor Jim Leebens-Mack, University of Georgia | Climbing Through the Green Tree of Life to Investigate Plant Gene and Genome Evolution
Sponsor(s):
Biology
Friday, November 18, 2022
3:30 pm - 4:30 pm
Interpretable Gaussian process models for genomic data
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 21, 2022
12:00 pm - 1:00 pm
Didong Li
A Different Track: Being a Scientist in Industry
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 28, 2022
12:00 pm - 1:00 pm
Joe Volpe
Towards Programmable Genome, Proteome, and Cell Engineering
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, December 05, 2022
12:00 pm - 1:00 pm
Pranam Chatterjee
How do grasses grow?
Sponsor(s):
Duke Center for Genomic and Computational Biology (GCB), Biostatistics and Bioinformatics, Computational Biology and Bioinformatics (CBB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, January 30, 2023
12:00 pm - 1:00 pm
Annis Richardson, PhD
Biochemical activity is the default DNA state in eukaryotes
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 06, 2023
12:00 pm - 1:00 pm
Carl de Boer, PhD
Towards neoantigen targeting personalized cancer immunotherapies which actually work
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 20, 2023
12:00 pm - 1:00 pm
Alex Rubinsteyn, PhD
Duke University Colloquium in Organic Chemistry Featuring Dr. Michelle Garnsey and Profs. Robert Knowles and David Nagib
Sponsor(s):
Chemistry
Friday, February 24, 2023
1:30 pm
Dr. Michelle Garnsey and Profs. Robert Knowles and David Nagib
Using computational multiomics to inform cardiovascular disease, cancer and autoimmunity
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 27, 2023
12:00 pm - 1:00 pm
Kelly Ruggles, PhD
Systems Biology Insights Into Antimicrobial Resistance Evolution and Physiology
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, March 27, 2023
12:00 pm - 1:00 pm
Jason Yang
RBPzoo: The Motifs, Binding Interface and Evolution History of 30,000 Eukaryotic RNA-binding Proteins (RBPs)
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 03, 2023
12:00 pm - 1:00 pm
Quaid Morris
Multiomic Characterization of Cell State Heterogeneity in Human Brain Tumors
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 10, 2023
12:00 pm - 1:00 pm
Anoop Patel
Community-Scale Metabolic Menables Precision Microbiome Engineering
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 17, 2023
12:00 pm - 1:00 pm
Sean Gibbons
Biology Seminar | Professor Fumiaki Katagiri, University of Minnesota | How can plants stay in this world while their pathogens can evolve much faster?
Sponsor(s):
Biology
Thursday, May 18, 2023
1:30 pm - 2:30 pm
Machine Learning for Precise Diagnostics and Therapeutics
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, August 28, 2023
12:00 pm - 1:00 pm
Rohit Singh, PhD
Common Variants Influence Immunotherapy Response
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 11, 2023
12:00 pm - 1:00 pm
Hannah Carter
High-Fidelity DNA Sequencing of the Single-Strand Origins of Mutations
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 18, 2023
12:00 pm - 1:00 pm
Gilad Evrony
Driving Impact in Healthcare through Data Science at Scale
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 25, 2023
12:00 pm - 1:00 pm
Jeff Headd
Longitudinal Bioinformatics Analysis to Correct the Drug Development Paradigm in Oncology
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 02, 2023
12:00 pm - 1:00 pm
Dr. Mustafa Khasraw
Mapping the Rules of Glioblastoma using Single Cell and Spatial Genomics
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 09, 2023
12:00 pm - 1:00 pm
Omer Bayraktar
Chemistry Seminar Presented by Prof. Kelley Young "Galvin Scholars Program: A Model for STEM Retention and Success"
Sponsor(s):
Chemistry
Friday, October 20, 2023
1:30 pm - 2:30 pm
Kelley Young, Notre Dame
Computational Methods for Studying the 3D Organization of the Human Genome
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 23, 2023
12:00 pm - 1:00 pm
Ferhat Ay
Computational Approaches to Delineate Interactions Between Mutagenic Signatures, Cellular Processes and Environment
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 30, 2023
12:00 pm - 1:00 pm
Teresa Przytycka
Embryo-Scale Reverse Genetics at Single-Cell Resolution
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 06, 2023
12:00 pm - 1:00 pm
Cole Trapnell
Encoding Physical Properties of the Cytosol
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 13, 2023
12:00 pm - 1:00 pm
Amy Gladfelter
Towards a Mathematical Theory of Development
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, November 20, 2023
12:00 pm - 1:00 pm
Geoff Schiebinger
Next-generation precision medicine through covalent reactivity: from click chemistry to ‘undruggable’ targets
Sponsor(s):
Chemistry
Friday, January 12, 2024
1:30 pm - 2:30 pm
Qinheng Zheng, University of California San Francisco
Minimally Invasive Neuroelectronics
Sponsor(s):
Chemistry
Friday, January 19, 2024
1:30 pm - 2:30 pm
Dr. Anqi Zhang, Stanford University
The Microbes Less Traveled: Genomic Technologies for Non-model Microbes
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, January 22, 2024
12:00 pm - 1:00 pm
Josh Granek
AI / ML in Big Pharma – Omics, Molecular Design and Clinical Data Analysis
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, January 29, 2024
12:00 pm - 1:00 pm
Ziv Bar-Joseph
Distribution of Mutation Risk Across the Human Genome
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 05, 2024
12:00 pm - 1:00 pm
Fran Supek
Data-Driven Understanding of the Single-Cell Space in Tumor Microenvironment
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 19, 2024
12:00 pm - 1:00 pm
Yi Zhang
Quantum Computational Insights Into the Chemical Versatility and Spectral Signatures of Flavins
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, February 26, 2024
12:00 pm - 1:00 pm
Anne-Frances Miller
Methods for Long-Horizon Event Prediction from Electronic Health Record Data
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, March 04, 2024
12:00 pm - 1:00 pm
Matt Engelhard
Incorporating Deep Learning Methods to Complex Trait Genetics
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, March 18, 2024
12:00 pm - 1:00 pm
Hae Kyung Im
Enhancing Statistical Rigor in Single-Cell and Spatial Omics Data Analysis Using Synthetic Negative Controls
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, March 25, 2024
12:00 pm - 1:00 pm
Jessica Li
Mapping the Cellular Determinants of Genome Editing in Human Cells
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Center for Advanced Genomic Technologies, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 01, 2024
12:00 pm - 1:00 pm
Britt Adamson
Single-Cell Paired RNA & ATAC: Surveying broad multi-modal coordination in development and cancer resistance
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 08, 2024
12:00 pm - 1:00 pm
Kevin Lin
Engineering Poison Exons to Treat Huntington’s Disease
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, April 15, 2024
12:00 pm - 1:00 pm
Liana Lareau
Chemistry Seminar Presented by Prof. Lisa Olshansky: Emergent Properties from Dynamicity: Investigating Conformational Control in Biomimetic Inorganic Systems
Sponsor(s):
Chemistry, Duke Materials Initiative, and Mechanical Engineering and Materials Science (MEMS)
Wednesday, April 17, 2024
3:00 pm - 4:00 pm
Lisa Olshansky, University of Illinois Urbana-Champaign
NC CER Symposium Seminar: Regis Komperda presents: Measurement in chemistry education: Examining the past and supporting the future
Sponsor(s):
Chemistry
Friday, June 07, 2024
2:00 pm - 3:00 pm
Regis Komperda- San Diego State University
Elucidating the role of metal-protein and metal-peptide interactions in microbial cellular stress
Sponsor(s):
Chemistry
Friday, June 14, 2024
11:00 am - 12:00 pm
Taylor Outlaw, Ph.D. Candidate
Applications of Deep Learning in Healthcare
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 09, 2024
12:00 pm - 1:00 pm
Ricardo Henao
Deep Neural Networks Really Are the Right Way for a Biostatistician to Analyze Biological Data or: How I Learned to Stop Worrying and Love the DNN
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 16, 2024
12:00 pm - 1:00 pm
David Page
Deciphering Odor Recognition
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 23, 2024
12:00 pm - 1:00 pm
Hiro Matsunami
From Pixels to Pathways: Computational Connection of Molecules to Multicell Modules
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biomedical Engineering (BME), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, September 30, 2024
12:00 pm - 1:00 pm
John Hickey
Leveraging High Performance Computing and AI to Advance Biomedical Discovery
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biomedical Engineering (BME), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 07, 2024
12:00 pm - 1:00 pm
Ravi Madduri
Scalable Natural Language Processing to Transform Healthcare
Sponsor(s):
Computational Biology and Bioinformatics (CBB), Biomedical Engineering (BME), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 21, 2024
12:00 pm - 1:00 pm
Monica Agrawal
One Step at a Time: Exploring Multiple Ways to Improve a Machine Learning Model to Predict a Future Autism Diagnosis
Sponsor(s):
Computational Biology and Bioinformatics (CBB), AI Health, Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Duke Clinical Research Institute (DCRI), Population Health Sciences, Precision Genomics Collaboratory, and School of Medicine (SOM)
Monday, October 28, 2024
12:00 pm - 1:00 pm
Ben Goldstein
Randomized Algorithms, Bayesian Phylogenetics, and Computational Vaccine Design
Sponsor(s):
Computational Biology and Bioinformatics (CBB), AI Health, Biostatistics and Bioinformatics, Center for Statistical Genetics and Genomics (StatGen), Duke Center for Genomic and Computational Biology (GCB), Population Health Sciences, School of Medicine (SOM), and Statistical Science
Monday, November 04, 2024
12:00 pm - 1:00 pm
Scott Schmidler
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