Data Analysis for 10x Visium Spatial Transcriptomics Data: Workshop 1
Sponsor(s): Computational Biology and Bioinformatics (CBB), Biostatistics and Bioinformatics, Duke Center for Genomic and Computational Biology (GCB), Precision Genomics Collaboratory, and School of Medicine (SOM)
Cost: Free but registration is required
As spatial transcriptomics becomes a more prevalent tool in cancer, neurology studies and more, do you wonder how to analyze the data to make sense of the biology?
This workshop includes three hands-on sessions (1.5-2 hours each), that will:
•Introduce the 10x Visium platform: experimental procedures, applications, advantage & disadvantage compared to other technologies
•Teach you step-by-step the analysis for Visium data: preprocessing, clustering and visualization
•Downstream analyses: integration with single-cell data, using deconvolution tools to find cell types and cell-cell interactions
Type: MEDICINE, ENGINEERING, NATURAL SCIENCES, PANEL/SEMINAR/COLLOQUIUM, WORKSHOP/SHORT COURSE, and RESEARCH
Contact: Miko Liu





